Table 2 1 SNP or 2-SNP subsets with the highest group accuracies using LDA and sIB for predicting psoriasis
Subsets | Components | Test accuracy among controls with ≥0.4 among cases(Bootstrap mean and 95% CI) | Components | Test accuracy among cases with ≥0.4 among controls(Bootstrap mean and 95% CI) |
|---|---|---|---|---|
LDA | ||||
1 SNP | rs7507133 on 19 | 0.582(0.586, 0.555-0.613) | rs231390 on 2 | 0.607(0.591, 0.558-0.628) |
2 SNPs,based on all combinations | ___* | ___* | ____ Δ | ____ Δ |
sIB | Â | Â | Â | Â |
1 SNP | rs12191877 on 6 | 0.761(0.760, 0.735-0.785) | rs7773175 on 6 | 0.731(0.731, 0.694-0.764) |
2 SNPs-based on all combinations | rs12191877 on 6 rs3823418 on 6 | 0.850(0.850, 0.826-0.870) | rs1265078 on 6 rs1466215 on 4 | 0.749(0.748, 0.718-0.779) |