# | Specimen | PCR University of New Haven | PCR Australian Biologics | Sequencing |
---|---|---|---|---|
1 | Whole callus | pyrG, fla, ospC | 16S rRNA | pyrG, fla, ospC |
2 | Whole callus | pyrG, fla, 16S rRNA | 16S rRNA | pyrG |
3 | Whole callus | fla, pyrG, 16S rRNA, uvrA, ospC | 16S rRNA | 16S RNA, pyrG, fla, uvrA, ospC |
3 | Blood culture | fla | ||
4 | Callus section | 16S rRNA | ||
4 | Blood culture | fla | ||
5 | Whole callus | pyrG | 16S rRNA | pyrG |
6 | Skin culture | 16S rRNA | ||
7 | Blood culture | fla | ||
8 | Whole callus | pyrG, 16S rRNA, fla | pyrG, fla, | |
8 | Blood culture | fla, pyrG | fla | |
9 | Skin culture | fla | fla | |
10 | Whole callus | 16S rRNA, pyrG, fla | 16S rRNA | 16S rRNA, pyrG |
10 | Intestinal specimen | 16S rRNA | ||
11 | Whole callus | fla+/- indeterminate | Inhibited | |
13 | Whole callus | uvrA | uvrA | |
13 | Blood culture | pyrG | 16S rRNA | |
13 | Skin culture | pyrG | ||
14 | Blood culture | fla | 16S rRNA | fla |
14 | Vaginal culture | fla | 16S rRNA | fla |
15 | Whole callus | 16S rRNA | ||
16 | Whole callus | rpoC | rpoC | |
17 | Whole callus | pyrG, uvrA | 16S rRNA | pyrG, uvrA |
17 | Blood culture | Real-time 16S rRNA +/- equivocal | ||
18 | Whole callus | fla | 16S rRNA | fla |
21 | Skin culture | 16S rRNA +/- equivocal | ||
23 | Whole callus | 16S rRNA | rpoC* | |
24 | Blood culture | fla | 16S rRNA | |
24 | Vaginal culture | 16S rRNA | rpoC** |